All functions

annulus.matrix()

Annulus matrix

ants

Ant Biodiversity Data

background()

Background sample

bearing.distance()

Bearing and Distance

breeding.density()

Breeding density areas (aka, core habitat areas)

built.index()

built index

cgls_urls()

Provide URL's for Copernicus Global Land Service datasets

chae()

Canine-Human Age Equivalent

chen

Cross-correlation data from Chen (2015)

class.comparison()

Class comparison between two nominal rasters

classBreaks()

Class breaks

collinear()

Collinearity test

combine()

raster combine

concordance()

Concordance test for binomial models

conf.interval()

Confidence interval for mean or median

convexHull()

Alpha Convex Hull

cor.data

Various correlation structures

correlogram()

Correlogram

cross.tab()

Class comparison between two nominal rasters

crossCorrelation()

Spatial cross correlation

csi()

Cosine Similarity Index

curvature()

Surface curvature

dahi()

Diurnal Anisotropic Heat Index

date_seq()

date sequence

daymet.point()

DAYMET point values

daymet.tiles()

DAYMET Tile ID's

DAYMET_tiles

DAYMET climate tile index

dispersion()

Dispersion (H-prime)

dissection()

Dissection

divergence()

divergence

download.daymet()

Download DAYMET

download.hansen()

Download Hansen Forest 2000-2013 Change

download.prism()

Download PRISM

effect.size()

Cohen's-d effect size

elev

Elevation raster

erase.point()

Erase points

explode()

Explodes multipart features

extract.vertices()

Extract vertices for polygons or lines

focal.lmetrics()

Focal landscape metrics

fuzzySum()

Fuzzy Sum

gaussian.kernel()

Gaussian Kernel

geo.buffer()

Buffer geographic data

group.pdf()

Probability density plot by group

hexagons()

Hexagons

hli()

Heat Load Index

hsp()

Hierarchical Slope Position

hybrid.kmeans()

Hybrid K-means

idw.smoothing()

Inverse Distance Weighted smoothing

impute.loess()

Impute loess

insert()

Insert a row or column into a data.frame

insert.values()

Insert Values

is.empty()

is.empty

is.whole()

is.whole

kde.2D()

2-dimensional kernel density estimate

kendall()

Kendall tau trend with continuity correction for time-series

kl.divergence()

Kullback-Leibler divergence (relative entropy)

knn()

Spatial K nearest neighbor

land.metrics()

Landscape metrics for points and polygons

local.min.max()

Local minimum and maximum

loess.boot()

Loess Bootstrap

loess.ci()

Loess with confidence intervals

logistic.regression()

Logistic and Auto-logistic regression

max_extent()

Maximum extent of multiple rasters

moments()

moments

morans.plot()

Autocorrelation Plot

mwCorr()

Dutilleul moving window bivariate raster correlation

nni()

Average Nearest Neighbor Index (NNI)

nth.values()

Nth values

o.ring()

Inhomogeneous O-ring

oli.asw()

Query AWS-OLI

optimal.k()

optimalK

optimized.sample.variance()

Optimized sample variance

outliers()

Outliers

overlap()

Niche overlap (Warren's-I)

parea.sample()

Percent area sample

parse.bits()

Parse bits

partial.cor()

Partial and Semi-partial correlation

plot(<effect.size>)

Plot effect size

plot(<loess.boot>)

Plot Loess Bootstrap

point.in.poly()

Point and Polygon Intersect

poly.regression()

Local Polynomial Regression

polygon_extract()

polygon raster extract

polyPerimeter()

Polygon perimeter

pp.subsample()

Point process random subsample

print(<cross.cor>)

Print spatial cross correlation

print(<effect.size>)

Print effect size

print(<loess.boot>)

Print Loess bootstrap model

proximity.index()

Proximity Index

pseudo.absence()

Pseudo-absence random samples

pu

Biodiversity Planning Units

quadrats()

Quadrats

random.raster()

Random raster

raster.change()

Raster change between two nominal rasters

raster.deviation()

Raster local deviation from the global trend

raster.downscale()

Raster Downscale

raster.entropy()

Raster Entropy

raster.gaussian.smooth()

Gaussian smoothing of raster

raster.invert()

Invert raster

raster.kendall()

Kendall tau trend with continuity correction for raster time-series

raster.mds()

Raster multidimensional scaling (MDS)

raster.modified.ttest()

Dutilleul moving window bivariate raster correlation

raster.moments()

Raster moments

raster.transformation()

Statistical transformation for rasters

raster.vol()

Raster Percent Volume

raster.Zscore()

Modified z-score for a raster

rasterCorrelation()

Raster correlation

rasterDistance()

Raster Distance

remove.holes()

Remove polygon holes

rm.ext()

Remove extension

rotate.polygon()

Rotate polygon

sa.trans()

Trigonometric transformation of a slope and aspect interaction

sample.annulus()

Sample annulus

sample.line()

Systematic or random point sample of line(s)

sample.poly()

Sample Polygons

sampleTransect()

Sample transect

sar()

Surface Area Ratio

se.news()

spatialEco news

separability()

separability

sg.smooth()

Savitzky-Golay smoothing filter

shannons()

Shannon's Diversity (Entropy) Index

shift()

shift

similarity()

Ecological similarity

smooth.time.series()

Smooth Raster Time-series

sobal()

Sobel-Feldman operator

sp.kde()

Spatial kernel density estimate

sp.na.omit()

sp na.omit

spatial.select()

Spatial Select

spectral.separability()

spectral separability

spherical.sd()

Spherical Variance or Standard Deviation of Surface

srr()

Surface Relief Ratio

stratified.random()

Stratified random sample

subsample.distance()

Distance-based subsampling

summary(<cross.cor>)

Summary of spatial cross correlation

summary(<effect.size>)

Summarizing effect size

summary(<loess.boot>)

Summarizing Loess bootstrap models

swvi()

Senescence weighted Vegetation Index (swvi)

time_to_event()

Time to event

topo.distance()

Topographic distance

tpi()

Topographic Position Index (tpi)

trasp()

Solar-radiation Aspect Index

trend.line()

trend.line

tri()

Terrain Ruggedness Index

vrm()

Vector Ruggedness Measure (VRM)

winsorize()

Winsorize transformation

wt.centroid()

Weighted centroid

zonal.stats()

zonal.stats